wiki:gene_exon_transcript_count

Version 3 (modified by pacthoen, 11 years ago) (diff)

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Date: 06-november-2013
Analysis by: Peter-Bram 't Hoen

The combined gene counts for the 2330 samples from run 1 are available on the VM: /virdir/Backup/run_1_gene_counts/combined_gene_count_run_1.txt and were generated using this script: R script for merging gene count tables
Subsequently, pairwise Spearman correlations were calculated. From these the median Spearman correlation for each sample to each other sample was calculated. This is also called the D-statistic. The D-statistics (ranked from low to high) can be found in this file Median Spearman correlations

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