Changes between Version 44 and Version 45 of WikiStart


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Timestamp:
Feb 4, 2011 3:39:53 PM (11 years ago)
Author:
Patrick Deelen
Comment:

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  • WikiStart

    v44 v45  
    1313   * SchematicOverview - overview of the pipelines needed
    1414   * SnpCallingPipeline - description of the variation analysis pipeline (UMCG)
     15   * CompareSequenceDataWithGenotypeChip - comparison of sequence data vs genotype chip data (UMCG)
    1516   * CoverageAnalysisPipeline - description of the coverage analysis pipeline (AMC)
    1617   * ChipBasedQcPipeline - description of the chip data comparison QC pipeline (EMC)
     
    2021   * GenomeViewer - view read and snp data in their genomic context, e.g. using IGV
    2122   * [http://www.molgenis.org/wiki/NgsWorkbench Next Generation Sequence LIMS] - track and trace all GoNL samples and analysis (UMCG)
    22   * '''Genotype analysis and imputation (WP2)'''
     23 * '''Genotype analysis and imputation (WP2)'''
    2324   * TrioAwarePhasingPipeline - phasing the individuals using trio information (EMC)
    2425   * SnpAnnotationPipeline - annotating SNPs with known functional information (LUMC,UMCG)
    2526   * ImputationPipeline - description of the imputation pipeline (VU,UMCG)
    26   * '''Catalogue and search of biobanks (WP3)'''
     27 * '''Catalogue and search of biobanks (WP3)'''
    2728   * [http://www.phenoflow.org/wiki/BiobankCatalog Catalog of Dutch biobanks] - in collaboration with [https://wiki.nbic.nl/index.php/Biobanking NBIC biobanking task force]
    2829   * [https://sites.google.com/a/nbiceng.net/hackathonii Connecting biobanks Hackaton] - in collaboration with [https://wiki.nbic.nl/index.php/Interoperability NBIC interoperability task force]
    29   * '''Genomic biobank IT infrastructure (WP4)'''
     30 * '''Genomic biobank IT infrastructure (WP4)'''
    3031   * DataManagement - how we use MOLGENIS to track/trace data and tools (UMCG)
    3132   * WorkflowTools - how to configure, manage and run pipelines (UMCG,AMC)
     
    3738
    3839*Work organization based on regenboog project. Clearly there is much connection between all work.
    39 
    4040= Using this wiki =
    4141As all Wiki pages, this page is editable, this means that you can