Changes between Version 3 and Version 4 of DataConcordance


Ignore:
Timestamp:
Feb 4, 2011 3:49:53 PM (13 years ago)
Author:
Patrick Deelen
Comment:

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  • DataConcordance

    v3 v4  
     1= Compare Sequence Data With !GenotypeChip =
    12Status: Alpha Authors: Patrick Deelen, Morris Swertz
    23
    34Tool to compare sequence data with data from genotyping chips.
    45
    5 = Features =
     6== Features ==
    67 * Overview of concordance per sample
    78 * Matrix of all sequence samples vs all genotype samples
    … …  
    910 * Performance per SNP
    1011
    11 = Input =
     12== Input ==
    1213The genotype data input is currently PED/MAP as generated by [http://pngu.mgh.harvard.edu/~purcell/plink/ plink].
    1314
    … …  
    1718 * Q20 (as provided by BGI)
    1819 * CNS
    19 = Future =
     20
     21== Future ==
    2022 * Plots to give more insight in SNP performance