Changes between Version 34 and Version 35 of SnpCallingPipeline

Timestamp:

Oct 16, 2010 6:41:07 PM (14 years ago)

Author:

Morris Swertz

Comment:

--

SnpCallingPipeline

@@ -28 +28 @@
         "flowcell_lane3.aligned.bam"
         "sample.aligned.bam"
-        "QC reports"
-        "VCF"
+        "sample QC reports"
+        "sample_chr[1-24].vcf"
 
         node [shape=ellipse,color=yellow]
@@ -61 +61 @@
                 "flowcell_lane2.aligned.bam" -> Merge
                 "flowcell_lane3.aligned.bam" -> Merge
-                FixMateInformation -> IndelGenotyperV2 -> FilterSingleCalls -> UnifiedGenotyper -> Filtration -> VariantEval -> "QC reports"
-Filtration -> VCF
+                FixMateInformation -> IndelGenotyperV2 -> FilterSingleCalls -> UnifiedGenotyper -> Filtration -> VariantEval -> "sample QC reports"
+Filtration -> "sample_chr[1-24].vcf"
                 label = "Per Sample*Chromosome (750*24=18k)";
         }