= Minutes of SV skype call on October 13rd =

== Participants ==
Victor, Lennart, Najaf, Aby, Leon, Laurent, Abdel

== Minutes ==

Pilot phase SV detection run
* BreakSeq: Slavik is working on the reference set using hg19 since the tool only supports hg18 now.
* BreakDancer: Jayne/Joep made some parameter changes on the pipeline installed at Groningen cluster. Will make new SV calls for the pilot dataset.
* Dindel: Laurent finished the SV call and is working now on the filtering part. Aim to deliver the result next week.
* GenomeStrip: Bob is continuing on the filtering part. Aim to deliver the result next week.

Pilot phase validation


Full GoNL dataset